Student Protein Assignments:
I've assigned each of you two unique proteins to work with. These proteins will be the subject of your presentation and paper. On the last week of class, you will give a 15 minute talk about your two proteins to the class. On the final day of class, you will turn in a 15-20 page review paper describing both of your proteins. The grading rubrics and detailed explanations of what is expected for each part of the assignment are below.
Protein Assignment Presentation Rubric
Protein Assignment Review Article Rubric
Lukas Ballard
Torpedo californica Acetylcholinesterase (2ACE)
Homo sapiens Butyrylcholinesterase (3O9M)
Lucas Boncorddo
Homo sapiens Cystatin (1NB5)
Ixodes scapularis Salivary Cystatin (3LI7)
Leslie Burch
NusG (1NPR, 2K06, 2JVV)
Methanococcus maripaludis RadA recombinase (3ETL)
Stephanie Henry
Homo sapiens Sphingosine Kinase 1 (3VZB, 3VZC, 3VZD)
Escherichia coli Integral Membrane Diacylglycerol Kinase (3ZE3)
Sharon Housand
Leucosporidium Ice Binding Protein (3UYV)
Streptococcus pneumoniae Surface Protein (3ZPP)
Grace Jones
Homo sapiens Macrophage Metalloelastase (4H30)
Homo sapiens FKBP52 (4LAW)
Nicholas Miller
Trypsanosoma brucei Triose Phosphate Isomerase (4JEQ)
Trypsanosoma brucei Thiamin Phosphate Synthase (2Y70)
Jamie Murakami
Arabidopsis thalianaUV-B Sensing Protein, UVR8 (4D9S)
Unclassified Gamma Proteobacterium HOT75 Proteorhodopsin (4KNF)
Charles Nelson
SARS Coronavirus Main Protease (4HI3)
Ruminococcus flavefaciens Cellulosome-related Protein Module (4EYZ)
Matthew Raad
Escherichia coli NAD+ Depedent DNA Ligase (2OWO)
Homo sapiens ATP-dependent DNA Ligae (1X9N)
Rosa Razo
Bacillus sp. SG-1 3-oxoacyl-(Acyl-carrier-protein) reductase (4NBU)
Xanthomonas capestris 3-oxoacyl-[ACP] synthase III (3ROW)
Derion Reid
Ternary Complex of the Beta-2 Adrenergic Receptor (3SN6)
Insulin / Insulin Receptor Complex (3W11, 3W12, 3W13, 3W14)
James Vinton
Homo sapiens APAF-1 (3J2T)
Homo sapiens Caspase-9 (2AR9)
Sarah Wicks
Homo sapiens CDK2 (3ULI, 4FR3, 4FKI, 4FKJ, 4FKL)
Homo sapiens CDK4 (2W99, 2W9Z, 2W9F, 3G33)