1 | d1k78a1 |
|
|
92.2 |
36 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain |
2 | d6paxa1 |
|
|
92.0 |
39 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain |
3 | d1mkma1 |
|
|
75.5 |
15 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional regulator IclR, N-terminal domain |
4 | c6paxA_ |
|
|
68.0 |
28 |
PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6;
PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
|
5 | d1pdnc_ |
|
|
67.3 |
28 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain |
6 | c5whmB_ |
|
|
60.1 |
17 |
PDB header:transcription Chain: B: PDB Molecule:iclr family transcriptional regulator;
PDBTitle: crystal structure of iclr family transcriptional regulator from2 brucella abortus
|
7 | c2k27A_ |
|
|
59.7 |
26 |
PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8;
PDBTitle: solution structure of human pax8 paired box domain
|
8 | c4i7hA_ |
|
|
53.2 |
16 |
PDB header:transcription Chain: A: PDB Molecule:peroxide stress sensing regulator;
PDBTitle: structural basis for peroxide sensing and gene regulation by perr from2 streptococcus pyogenes
|
9 | d1hlva1 |
|
|
50.3 |
24 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding |
10 | c2r0qF_ |
|
|
48.9 |
30 |
PDB header:recombination/dna Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3;
PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex
|
11 | c2fe3B_ |
|
|
45.6 |
21 |
PDB header:dna binding protein Chain: B: PDB Molecule:peroxide operon regulator;
PDBTitle: the crystal structure of bacillus subtilis perr-zn reveals a novel2 zn(cys)4 structural redox switch
|
12 | c4m6fA_ |
|
|
44.3 |
20 |
PDB header:hydrolase/dna Chain: A: PDB Molecule:dna-invertase;
PDBTitle: dimer of the g-segment invertase bound to a dna substrate
|
13 | c3fm5D_ |
|
|
39.3 |
20 |
PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator;
PDBTitle: x-ray crystal structure of transcriptional regulator (marr family)2 from rhodococcus sp. rha1
|
14 | c3mwmA_ |
|
|
36.5 |
33 |
PDB header:transcription Chain: A: PDB Molecule:putative metal uptake regulation protein;
PDBTitle: graded expression of zinc-responsive genes through two regulatory2 zinc-binding sites in zur
|
15 | c2o03A_ |
|
|
36.5 |
23 |
PDB header:gene regulation Chain: A: PDB Molecule:probable zinc uptake regulation protein furb;
PDBTitle: crystal structure of furb from m. tuberculosis- a zinc uptake2 regulator
|
16 | c1u78A_ |
|
|
35.9 |
15 |
PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase;
PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
|
17 | c5fd6A_ |
|
|
34.7 |
21 |
PDB header:transcription Chain: A: PDB Molecule:ferric uptake regulation protein;
PDBTitle: zinc-bound manganese uptake regulator
|
18 | c2elhA_ |
|
|
33.4 |
17 |
PDB header:dna binding protein Chain: A: PDB Molecule:cg11849-pa;
PDBTitle: solution structure of the cenp-b n-terminal dna-binding2 domain of fruit fly distal antenna cg11849-pa
|
19 | c4fhtA_ |
|
|
33.0 |
14 |
PDB header:transcription Chain: A: PDB Molecule:pcav transcriptional regulator;
PDBTitle: crystal structure of the pcav transcriptional regulator from2 streptomyces coelicolor in complex with its natural ligand
|
20 | d2fbha1 |
|
|
31.3 |
30 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
21 | c2xigA_ |
|
not modelled |
31.3 |
28 |
PDB header:transcription Chain: A: PDB Molecule:ferric uptake regulation protein;
PDBTitle: the structure of the helicobacter pylori ferric uptake2 regulator fur reveals three functional metal binding sites
|
22 | c5nl9B_ |
|
not modelled |
30.1 |
11 |
PDB header:dna binding protein Chain: B: PDB Molecule:transcriptional regulator (fur family);
PDBTitle: crystal structure of a peroxide stress regulator from leptospira2 interrogans
|
23 | c3j20Q_ |
|
not modelled |
30.1 |
29 |
PDB header:ribosome Chain: Q: PDB Molecule:30s ribosomal protein s15p/s13e;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
|
24 | c4razB_ |
|
not modelled |
28.1 |
26 |
PDB header:metal binding protein Chain: B: PDB Molecule:dna-binding transcriptional dual regulator of siderophore
PDBTitle: crystal structure of magnetospirillum gryphiswaldense msr-1 holo-fur
|
25 | c5z7iC_ |
|
not modelled |
28.1 |
28 |
PDB header:dna binding protein/dna Chain: C: PDB Molecule:cell cycle regulatory protein gcra;
PDBTitle: caulobacter crescentus gcra dna-binding domain(dbd)in complex with2 unmethylated dsdna
|
26 | c4mtdA_ |
|
not modelled |
27.1 |
23 |
PDB header:dna binding protein/dna Chain: A: PDB Molecule:zinc uptake regulation protein;
PDBTitle: zinc uptake regulator complexed with zinc and dna
|
27 | d1uxca_ |
|
not modelled |
25.4 |
21 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
28 | c4hblA_ |
|
not modelled |
25.3 |
17 |
PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of abfr of staphylococcus epidermidis
|
29 | c3deuB_ |
|
not modelled |
25.2 |
18 |
PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator slya;
PDBTitle: crystal structure of transcription regulatory protein slya from2 salmonella typhimurium in complex with salicylate ligands
|
30 | c6gh5M_ |
|
not modelled |
24.4 |
21 |
PDB header:transcription Chain: M: PDB Molecule:rna polymerase sigma-54 factor,rna polymerase sigma-54
PDBTitle: cryo-em structure of bacterial rna polymerase-sigma54 holoenzyme2 transcription open complex
|
31 | c2fu4B_ |
|
not modelled |
24.0 |
26 |
PDB header:dna binding protein Chain: B: PDB Molecule:ferric uptake regulation protein;
PDBTitle: crystal structure of the dna binding domain of e.coli fur (ferric2 uptake regulator)
|
32 | d1r71a_ |
|
not modelled |
23.8 |
13 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:KorB DNA-binding domain-like Family:KorB DNA-binding domain-like |
33 | c2fa5B_ |
|
not modelled |
22.7 |
21 |
PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator marr/emrr family;
PDBTitle: the crystal structure of an unliganded multiple antibiotic-2 resistance repressor (marr) from xanthomonas campestris
|
34 | c5w1eA_ |
|
not modelled |
22.5 |
19 |
PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: pobr in complex with phb
|
35 | c6u0iC_ |
|
not modelled |
22.2 |
20 |
PDB header:antitoxin Chain: C: PDB Molecule:antitoxin hicb;
PDBTitle: putative antitoxin hicb3 from escherichia coli str. k-12 substr. dh10b
|
36 | c1r71B_ |
|
not modelled |
21.9 |
16 |
PDB header:transcription/dna Chain: B: PDB Molecule:transcriptional repressor protein korb;
PDBTitle: crystal structure of the dna binding domain of korb in complex with2 the operator dna
|
37 | c5byhM_ |
|
not modelled |
21.1 |
21 |
PDB header:transferase Chain: M: PDB Molecule:rna polymerase sigma-54 factor;
PDBTitle: crystal structure of escherichia coli rna polymerase - sigma542 holoenzyme complex
|
38 | d2ve8a1 |
|
not modelled |
20.7 |
32 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:FtsK C-terminal domain-like |
39 | c5ui5I_ |
|
not modelled |
20.1 |
17 |
PDB header:transcription/dna Chain: I: PDB Molecule:rna polymerase sigma factor rpon;
PDBTitle: crystal structure of aquifex aeolicus sigman bound to promoter dna
|
40 | d2bv6a1 |
|
not modelled |
19.9 |
16 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
41 | c2qwwB_ |
|
not modelled |
19.7 |
15 |
PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
|
42 | c2gm4B_ |
|
not modelled |
19.5 |
26 |
PDB header:recombination, dna Chain: B: PDB Molecule:transposon gamma-delta resolvase;
PDBTitle: an activated, tetrameric gamma-delta resolvase: hin chimaera bound to2 cleaved dna
|
43 | c3tgnA_ |
|
not modelled |
19.4 |
24 |
PDB header:transcription Chain: A: PDB Molecule:adc operon repressor adcr;
PDBTitle: crystal structure of the zinc-dependent marr family transcriptional2 regulator adcr in the zn(ii)-bound state
|
44 | c4yifE_ |
|
not modelled |
19.3 |
16 |
PDB header:dna binding protein Chain: E: PDB Molecule:marr family protein rv0880;
PDBTitle: crystal structure of rv0880
|
45 | d3deua1 |
|
not modelled |
18.1 |
18 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
46 | c3bj6B_ |
|
not modelled |
17.8 |
24 |
PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcription regulator sp03579
|
47 | d1z91a1 |
|
not modelled |
17.8 |
18 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
48 | d2j5pa1 |
|
not modelled |
17.7 |
29 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:FtsK C-terminal domain-like |
49 | d1mzba_ |
|
not modelled |
17.3 |
27 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:FUR-like |
50 | d2hr3a1 |
|
not modelled |
17.0 |
15 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
51 | c6pcpA_ |
|
not modelled |
16.0 |
13 |
PDB header:dna binding protein Chain: A: PDB Molecule:marr family transcriptional regulator;
PDBTitle: mechanism for regulation of dna binding of bordetella bronchiseptica2 bpsr by 6-hydroxynicotinic acid
|
52 | d2hsga1 |
|
not modelled |
15.8 |
25 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
53 | c3pvpA_ |
|
not modelled |
15.7 |
16 |
PDB header:dna binding protein/dna Chain: A: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna
|
54 | d1lcda_ |
|
not modelled |
15.6 |
38 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
55 | c4hrvB_ |
|
not modelled |
15.2 |
19 |
PDB header:lipid binding protein Chain: B: PDB Molecule:putative lipoprotein gna1162;
PDBTitle: crystal structure of lipoprotein gna1162 from neisseria meningitidis
|
56 | d1gdta1 |
|
not modelled |
15.1 |
23 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain |
57 | c5nwtM_ |
|
not modelled |
15.1 |
21 |
PDB header:transferase Chain: M: PDB Molecule:rna polymerase sigma-54 factor,rna polymerase sigma-54
PDBTitle: crystal structure of escherichia coli rna polymerase - sigma542 holoenzyme complex
|
58 | c3izbO_ |
|
not modelled |
14.8 |
22 |
PDB header:ribosome Chain: O: PDB Molecule:40s ribosomal protein rps13 (s15p);
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
|
59 | c3s2wB_ |
|
not modelled |
14.8 |
15 |
PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the crystal structure of a marr transcriptional regulator from2 methanosarcina mazei go1
|
60 | c2x4hA_ |
|
not modelled |
14.5 |
18 |
PDB header:transcription Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
|
61 | c2l8nA_ |
|
not modelled |
14.2 |
28 |
PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional repressor cytr;
PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna
|
62 | c2lcvA_ |
|
not modelled |
13.8 |
28 |
PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional repressor cytr;
PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation
|
63 | d1uxda_ |
|
not modelled |
13.7 |
21 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
64 | c4a5pC_ |
|
not modelled |
13.4 |
18 |
PDB header:protein transport Chain: C: PDB Molecule:protein mxia;
PDBTitle: structure of the shigella flexneri mxia protein
|
65 | d1l8qa1 |
|
not modelled |
13.3 |
26 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:TrpR-like Family:Chromosomal replication initiation factor DnaA C-terminal domain IV |
66 | c2nnnB_ |
|
not modelled |
13.3 |
15 |
PDB header:transcription Chain: B: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa
|
67 | c5zc2B_ |
|
not modelled |
12.8 |
10 |
PDB header:flavoprotein Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
|
68 | c2pexA_ |
|
not modelled |
12.1 |
23 |
PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator ohrr;
PDBTitle: structure of reduced c22s ohrr from xanthamonas campestris
|
69 | c3eyyA_ |
|
not modelled |
12.0 |
26 |
PDB header:transport Chain: A: PDB Molecule:putative iron uptake regulatory protein;
PDBTitle: structural basis for the specialization of nur, a nickel-2 specific fur homologue, in metal sensing and dna3 recognition
|
70 | c3nrvC_ |
|
not modelled |
11.9 |
18 |
PDB header:transcription regulator Chain: C: PDB Molecule:putative transcriptional regulator (marr/emrr family);
PDBTitle: crystal structure of marr/emrr family transcriptional regulator from2 acinetobacter sp. adp1
|
71 | d1qpza1 |
|
not modelled |
11.9 |
21 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
72 | c3e6mD_ |
|
not modelled |
11.8 |
14 |
PDB header:transcription regulator Chain: D: PDB Molecule:marr family transcriptional regulator;
PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.
|
73 | c5jlsA_ |
|
not modelled |
11.8 |
8 |
PDB header:transcription Chain: A: PDB Molecule:adhesin competence repressor;
PDBTitle: crystal structure of adhesin competence repressor (adcr) from2 streptococcus pyogenes (c-terminally his tagged)
|
74 | c4etsB_ |
|
not modelled |
11.6 |
26 |
PDB header:metal binding protein Chain: B: PDB Molecule:ferric uptake regulation protein;
PDBTitle: crystal structure of campylobacter jejuni ferric uptake regulator
|
75 | d2bjca1 |
|
not modelled |
11.6 |
21 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
76 | c2krfB_ |
|
not modelled |
11.6 |
21 |
PDB header:transcription Chain: B: PDB Molecule:transcriptional regulatory protein coma;
PDBTitle: nmr solution structure of the dna binding domain of competence protein2 a
|
77 | c4q77B_ |
|
not modelled |
11.6 |
11 |
PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator rot;
PDBTitle: crystal structure of rot, a global regulator of virulence genes in2 staphylococcus aureus
|
78 | d1j1va_ |
|
not modelled |
11.3 |
19 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:TrpR-like Family:Chromosomal replication initiation factor DnaA C-terminal domain IV |
79 | c6nbhP_ |
|
not modelled |
10.9 |
29 |
PDB header:signaling protein Chain: P: PDB Molecule:long-acting parathyroid hormone analog;
PDBTitle: cryo-em structure of parathyroid hormone receptor type 1 in complex2 with a long-acting parathyroid hormone analog and g protein
|
80 | d1hsja1 |
|
not modelled |
10.6 |
8 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
81 | c2l0eA_ |
|
not modelled |
10.4 |
30 |
PDB header:membrane protein Chain: A: PDB Molecule:sodium/hydrogen exchanger 1;
PDBTitle: structural and functional analysis of tm vi of the nhe1 isoform of the2 na+/h+ exchanger
|
82 | c2rnjA_ |
|
not modelled |
10.3 |
16 |
PDB header:transcription Chain: A: PDB Molecule:response regulator protein vrar;
PDBTitle: nmr structure of the s. aureus vrar dna binding domain
|
83 | d1p4xa2 |
|
not modelled |
10.2 |
10 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
84 | c3zeyG_ |
|
not modelled |
10.2 |
27 |
PDB header:ribosome Chain: G: PDB Molecule:40s ribosomal protein s13, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
|
85 | c4nb5D_ |
|
not modelled |
10.2 |
14 |
PDB header:dna binding protein Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
|
86 | c2w57A_ |
|
not modelled |
9.9 |
30 |
PDB header:metal transport Chain: A: PDB Molecule:ferric uptake regulation protein;
PDBTitle: crystal structure of the vibrio cholerae ferric uptake2 regulator (fur) reveals structural rearrangement of the3 dna-binding domains
|
87 | c5eriA_ |
|
not modelled |
9.8 |
13 |
PDB header:transcription Chain: A: PDB Molecule:marr family transcriptional regulator;
PDBTitle: marr protein from peptoclostridium difficile da00132
|
88 | d1efaa1 |
|
not modelled |
9.4 |
25 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
89 | d2a61a1 |
|
not modelled |
9.3 |
18 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators |
90 | c4lu2A_ |
|
not modelled |
9.1 |
39 |
PDB header:odorant-binding protein Chain: A: PDB Molecule:10.7 kda salivary protein;
PDBTitle: structure of ljm19
|
91 | d1sfxa_ |
|
not modelled |
9.1 |
26 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:TrmB-like |
92 | c5muuI_ |
|
not modelled |
9.0 |
23 |
PDB header:virus Chain: I: PDB Molecule:major outer capsid protein;
PDBTitle: dsrna bacteriophage phi6 nucleocapsid
|
93 | c2zi0B_ |
|
not modelled |
8.9 |
31 |
PDB header:gene regulation/rna Chain: B: PDB Molecule:protein 2b;
PDBTitle: crystal structure of tav2b/sirna complex
|
94 | c2rdpA_ |
|
not modelled |
8.7 |
18 |
PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
|
95 | c6jqsA_ |
|
not modelled |
8.7 |
13 |
PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding response regulator;
PDBTitle: structure of transcription factor, gere
|
96 | c3boqB_ |
|
not modelled |
8.5 |
17 |
PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi
|
97 | c3cz3B_ |
|
not modelled |
8.5 |
31 |
PDB header:viral protein/rna Chain: B: PDB Molecule:protein 2b;
PDBTitle: crystal structure of tomato aspermy virus 2b in complex with sirna
|
98 | d2bmfa1 |
|
not modelled |
8.4 |
24 |
Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RNA helicase |
99 | c5nbcD_ |
|
not modelled |
8.3 |
23 |
PDB header:dna binding protein Chain: D: PDB Molecule:ferric uptake regulation protein;
PDBTitle: structure of prokaryotic transcription factors
|