Return to main results Retrieve Phyre Job Id

Job DescriptionASR85483.1_membrane_protein_[Mycobacterium_phage_Cain]
Confidence68.01%DateMon Jun 7 16:50:03 BST 2021
Rank4Aligned Residues36
% Identity28%Templatec6paxA_
PDB info PDB header:gene regulation/dnaChain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
Resolution2.50 Å
Model Dimensions (Å)X:21.473 Y:19.502 Z:25.489

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   237..240.........250.........260.........270..
Predicted Secondary structure 












Query SS confidence 



































Query Sequence  RAKVAQVLAEHAEGTAPSMIARKLQVGYSTVVRILD
Query Conservation   
 

  


    



 

 
 






 

  
Alig confidence 



































Template Conservation     
  

 
   
 
   

  
 

  

 


 
Template Sequence  DSTRQRIVELAHSGARPCDISRILQVSNGCVSKILG
Template Known Secondary structure  TT

T

Template Predicted Secondary structure 






Template SS confidence 



































   20.........30.........40.........50.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in JSmol

Send structure to FirstGlance for more viewing options


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D