|
Job Description | ASR85460.1_hypothetical_protein_SEA_CAIN_61_[Mycobacterium_phage_Cain] | Confidence | 3.87% | Date | Mon Jun 7 16:50:03 BST 2021 |
Rank | 72 | Aligned Residues | 24 |
% Identity | 54% | Template | c4dagA_ |
PDB info |
PDB header:viral protein/immune system | Chain: A: PDB Molecule:fusion glycoprotein f0; |
PDBTitle: structure of the human metapneumovirus fusion protein with2 neutralizing antibody identifies a pneumovirus antigenic site
|
Resolution | 3.39 Å |
|
  |   |
8 | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
Predicted Secondary structure |   |
|
|
|
| | | . | | |
| | | | | |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | T | N | Y | A | . |
E | V | G | R | V | R | I | P | M | S | G | T | A | R | S | P | E | G |
Query Conservation |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
S | T | T | N | Y | P | C | K | V | S | T | G | R | H | P | I | S | M | V | A | L | S | P | L | G |
Template Known Secondary structure |   |
S |
| S | S | S |
|
|
| | | | | S |
|
|
|
| | | | |
| S | S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
| | | |
|
|
|
|
|
| | | | | | |
|
| | |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
355 | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is now FREE for commercial users!
All images and data generated by Phyre2 are free to use in any
publication with acknowledgement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
  |
|
|
|