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Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence99.95%DateMon Jun 7 16:50:03 BST 2021
Rank24Aligned Residues160
% Identity17%Templated2igia1
SCOP infoRibonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40... ......50.....
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Query Sequence  QLIVVDLETTGLDYDTALPVEVGLLNVDTGESLYFVPHIT. . . . . . . . VEQLAAADPKAM
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Template Sequence  NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH
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TT

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   6...10.........20.........30.........40.........50.........60.....
 
   56...60.........70.........80..... ....90.........100.........110...
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Query Sequence  EINGYYERGLYREALTEQQTAVAWGEVQDW. . LRGNTFAGSNPAFDSTIVARQRVTYSMP
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Template Sequence  TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY
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   66...70.........80.........90.........100.........110.........120.....
 
   114.....120.........130.........140.........150.........160.........170...
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Query Sequence  FSPLTVGRVWHHRLADLAAYAAGKLNIDPTELEGLDAVAERLGVPVVNRHSAIGDAAATA
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Template Sequence  . . . . . . . . . FHYRYLDVSTLKELARRWKP. . . . . . . . . EILDGFTKQGTHQAMDDIRESV
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   126...130.........140..... ....150.........160.......
 
   174.....180.
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Query Sequence  FCFDMLRH
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Template Sequence  AELAYYRE
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   168.170.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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