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Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence99.94%DateMon Jun 7 16:50:03 BST 2021
Rank25Aligned Residues155
% Identity20%Templated1wlja_
SCOP infoRibonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20... ......30.........40.........50.........60..
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Query Sequence  QLIVVDLETTGLDYDTALPV. EVGLLNVDTGESLYFVPHITVEQLAAADPKAMEINGYYE
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Template Sequence  EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVL. . YDKFIRPEG. . EITDYRTRVSGVTP
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   6...10.........20.........30........ .40....... ..50.........60.
 
   63......70.........80.........90.........100.........110.........120..
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Query Sequence  RGLYREALTEQQTAVAWGEVQDWLRGNTFAGSNPAFDSTIVARQRVTYSMPFSPLTVGRV
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Template Sequence  QHMVGATPFAVARLEILQLL. . . . KGKLVVGHDLKHDFQALKEDMSGYTIYDT. . . . . . .
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   62.......70.........80. ........90.........100.........110
 
   123......130.........140.........150..... ....160. ........170........
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Query Sequence  WHHRLADLAAYAAGKLNIDPTELEGLDAVAERL. . . GVPVVN. RHSAIGDAAATAFCFDM
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Template Sequence  . . . . . . . . . . . STDRLLWREAKLVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQI
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   111........120.........130.........140.........150.........
 
   179180....
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Query Sequence  LRHTAA
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Template Sequence  SQRIRA
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   165....170
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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