Return to main results Retrieve Phyre Job Id

Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence99.97%DateMon Jun 7 16:50:03 BST 2021
Rank12Aligned Residues175
% Identity13%Templated1w0ha_
SCOP infoRibonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease
Resolution1.59
Model Dimensions (Å)X:48.285 Y:46.518 Z:35.093

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10....... ..20.........30... ......40.........50.....
Predicted Secondary structure 








....




...







Query SS confidence 














. . . .















. . .





















Query Sequence  KQLIVVDLETTGLDY. . . . DTALPVEVGLLNVDTG. . . ESLYFVPHITVEQLAAADPKAM
Query Conservation     
 

 




  ....    




 
     ...                      
Alig confidence 














....















...





















Template Conservation 
  
  
 



          





 
  
         
   
 
           
Template Sequence  DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI
Template Known Secondary structure  S





TT

TTS


TTT
SB

SSS
S

Template Predicted Secondary structure 



























Template SS confidence 



























































   128.130.........140.........150.........160.........170.........180.......
 
   56...60.........70.........80...... ...90.........100.........110.
Predicted Secondary structure 








....





Query SS confidence 






























. . . .
























Query Sequence  EINGYYERGLYREALTEQQTAVAWGEVQDWL. . . . RGNTFAGSNPAFDSTIVARQRVTYS
Query Conservation   
 


   
                     ....           

   
        
Alig confidence 






























....
























Template Conservation   




            
                            
   
        
Template Sequence  SLTGITQDQVDRADTFPQVLKKVIDWXKLKELGTKYKYSLLTDGSWDXSKFLNIQCQLSR
Template Known Secondary structure 


TSB
TTBTTTB
SSTTTTT
Template Predicted Secondary structure 





















Template SS confidence 



























































   188.190.........200.........210.........220.........230.........240.......
 
   112.......120.........130.........140.........150.........160. ........170
Predicted Secondary structure 




























.


Query SS confidence 

















































.








Query Sequence  MPFSPLTVGRVWHHRLADLAAYAAGKLNIDPTELEGLDAVAERLGVPVVN. RHSAIGDAA
Query Conservation                                      
  
    

    . 
 

 

 
Alig confidence 











.......






























.








Template Conservation             
.......                 
  
   
        
 

 

 
Template Sequence  LKYPPFAKKWIN. . . . . . . IRKSYGNFYKVPRSQTKLTIXLEKLGXDYDGRPHCGLDDSK
Template Known Secondary structure 



GGGS.......T

GGG
STT



S
TT
Template Predicted Secondary structure 








.......

















Template SS confidence 



























































   248.250......... 260.........270.........280.........290.........300
 
   171........180....
Predicted Secondary structure 
Query SS confidence 













Query Sequence  ATAFCFDMLRHTAA
Query Conservation   
  
   
     
Alig confidence 













Template Conservation   

 
   

  
 
Template Sequence  NIARIAVRXLQDGC
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 













   301........310....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in JSmol

Send structure to FirstGlance for more viewing options


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D