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Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence93.74%DateMon Jun 7 16:50:03 BST 2021
Rank96Aligned Residues139
% Identity16%Templatec5v5fA_
PDB info PDB header:transferaseChain: A: PDB Molecule:at3g11770; PDBTitle: crystal structure of rice1 (pnt2)
Resolution2.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  AKQLIVVDLETTGLDYDTALPVEVGLLNVDTGESLYFVPHITVEQLAAADPKAMEINGYY
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Template Sequence  GNRSIVFDVYWDVKSVSTKSEWRLCSVKFSTKNFCLFLRLPNPFCDNL. . . . . . . . . . . .
Template Known Secondary structure  STT
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   45....50.........60.........70.........80.........90..
 
   62.......70.........80.........90.........100.........110.........120.
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Query Sequence  ERGLYREALTEQQTAVAWGEVQDWLRGNTFAGSNPAFDSTIVARQRVTYSMPFSPLTVGR
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Template Sequence  . . . . . . . . . . . . . . . KDLYRFFA. SKFVTFVGVQIQEDLALLKENH. . . . . . . . . . . . . G
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   93......100 .........110.........120.. .
 
   122.......130.........140.........150.... .....160.. ..
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Query Sequence  VWHHRLADLAAYAAGKLNIDPTELEGLDAVAER. LGVPVVNR. . . . . . . . . . . . . . . . HS
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Template Sequence  IVIRSSLEIGKLAAKARGTPIVEFLGTRELAHKILWYDMSRLDSIQSKWDEASSNDRLEA
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   124.....130.........140.........150.........160.........170.........180...
 
   165....170.........180.
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Query Sequence  AIGDAAATAFCFDMLRH
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Template Sequence  AAIEGWLIFNVYDQLQQ
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   184.....190.........200
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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