Job Description ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] Confidence 97.03% Date Mon Jun 7 16:50:03 BST 2021 Rank 87 Aligned Residues 148 % Identity 8% Template c4q5vA_ PDB info PDB header:transferase/dna/rna Chain: A: PDB Molecule:dna polymerase alpha catalytic subunit; PDBTitle: crystal structure of the catalytic core of human dna polymerase alpha2 in ternary complex with an rna-primed dna template and aphidicolin Resolution 2.52 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure																		.													.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																		.													.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		Q	L	I	V	V	D	L	E	T	T	G	L	D	Y	D	T	.	A	L	P	V	E	V	G	L	L	N	V	D	.	.	.	.	.	.	.	.	.	T	G	E	S	L	Y	F	V	P	H	I	T	V	E	Q	L	A	A	A	D	.	.
Query Conservation																		.													.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																		.													.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		V	V	M	A	F	S	M	K	T	M	Q	N	A	K	N	H	Q	N	E	I	I	A	M	A	A	L	V	H	H	S	F	A	L	D	K	A	A	P	K	P	P	F	Q	S	H	F	C	V	V	S	K	P	K	D	C	I	F	P	Y	A
Template Known Secondary structure														S	S	S																		S	S	S				S	S	S		S										S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
			52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																														.
Query SS confidence		.																																														.
Query Sequence		.	P	K	A	M	E	I	N	G	Y	Y	E	R	G	L	Y	R	E	A	L	T	E	Q	Q	T	A	V	A	W	G	E	V	Q	D	W	L	R	G	N	T	F	A	G	S	N	P	.	A	F	D	S	T	I	V	A	R	Q	R	V	T
Query Conservation		.																																														.
Alig confidence		.																																.	.	.	.											.
Template Conservation																																		.	.	.	.
Template Sequence		F	K	E	V	I	E	K	K	N	V	K	V	E	V	A	A	T	E	R	T	L	L	G	F	F	L	A	K	V	H	K	I	.	.	.	.	D	P	D	I	I	V	G	H	N	I	Y	G	F	E	L	E	V	L	L	Q	R	I	N	V
Template Known Secondary structure										T							S	S																.	.	.	.			S					S	S	T	T	T	T
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.					630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		110	.	.	.	.													.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	M	P	F	.	.	.	.	.	.	.	.	.	.	.	.	S	P	L	T	V	G	R	V	W	H	H	R	L	A	D	L	A	A	Y	A	A	G	K	L	N	I	D	P	T	E	L	E	G	L	D	A	V	A	E	R	L
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	K	A	P	H	W	S	K	I	G	R	L	K	R	S	N	M	P	K	L	G	F	G	E	R	N	A	T	C	G	R	M	I	C	D	V	E	I	S	A	K	E	L	I	R	C	K	S	Y	H	L	S	E	L	V	Q	Q	I
Template Known Secondary structure		T	T		S		G	G	G	G	S	S	B			S	S												T	T	T	S																S			S
Template Predicted Secondary structure
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.

No model constructed - rank, confidence too low

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