Return to main results Retrieve Phyre Job Id

Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence99.96%DateMon Jun 7 16:50:03 BST 2021
Rank18Aligned Residues162
% Identity16%Templatec3tr8A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:oligoribonuclease; PDBTitle: structure of an oligoribonuclease (orn) from coxiella burnetii
Resolution2.50 Å
Model Dimensions (Å)X:46.539 Y:58.734 Z:33.343

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40....... ..50...
Predicted Secondary structure 


















........



Query SS confidence 













































. . . . . . . .





Query Sequence  AKQLIVVDLETTGLDYDTALPVEVGLLNVDTGESLYFVPHITVEQL. . . . . . . . AAADPK
Query Conservation      
 

 




      




 
                   ........      
Alig confidence 













































........





Template Conservation 
   
 

 




    
 






                
 
          
   
Template Sequence  DDNLIWLDLEXTGLDPERDRIIEIATIVTNSHLDILAEGPAFAIHQPDKLLTAXDNWNTS
Template Known Secondary structure  TT
SSS
TTT


TT








TTS
Template Predicted Secondary structure 
























Template SS confidence 



























































   5....10.........20.........30.........40.........50.........60....
 
   54.....60.........70.........80...... ...90.........100.........110.
Predicted Secondary structure 








..





Query SS confidence 
































. .
























Query Sequence  AMEINGYYERGLYREALTEQQTAVAWGEVQDWL. . RGNTFAGSNPAFDSTIVARQRVTYS
Query Conservation     
 


   
                     ..           

   
        
Alig confidence 
































..
























Template Conservation     
 


   
                
          




  

   
        
Template Sequence  HHTASGLLERVKNSSVDEVEAETLTLAFLEKYVSAGKSPLCGNSVCQDRRFLSRYXPRLN
Template Known Secondary structure  TST



TTTS
TT
S
SST
Template Predicted Secondary structure 

















Template SS confidence 



























































   65....70.........80.........90.........100.........110.........120....
 
   112.......120.........130.........140.........150.........160.........170.
Predicted Secondary structure 































Query SS confidence 



























































Query Sequence  MPFSPLTVGRVWHHRLADLAAYAAGKLNIDPTELEGLDAVAERLGVPVVNRHSAIGDAAA
Query Conservation                                      
  
    

     
 

 

  
Alig confidence 







.........













.........



















Template Conservation          .........
   
  
      .........           



 

 
Template Sequence  QFFHYRHL. . . . . . . . . DVTTLKILAQRWAP. . . . . . . . . QIAAAHIKESQHLALQDIRD
Template Known Secondary structure  S
S
.........
.........TTS




S
Template Predicted Secondary structure 





.........


.........








Template SS confidence 



























































   125....130.. .......140...... ...150.........160......
 
   172.......180.
Predicted Secondary structure 
Query SS confidence 









Query Sequence  TAFCFDMLRH
Query Conservation 
  
   
  
Alig confidence 









Template Conservation 

 


  
 
Template Sequence  SIEELRYYRA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 









   167..170......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in JSmol

Send structure to FirstGlance for more viewing options


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D