|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
Predicted Secondary structure |   |
![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
Query SS confidence |   |
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Query Sequence |   |
I | V | V | D | L | E | T | T | G | L | D | Y | D | T | A | L | P | V | E | V | G | L | L | N | V | D | T | G | E | S | L | Y | F | V | P | H | I | T | V | E | Q | L | A | A | A | D | P | K | A | M | E | I | N | G | Y | Y | E | R | G | L |
Query Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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| . | . | . | . | . |
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Template Conservation |   |
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| . | . | . | . | . |
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Template Sequence |   |
T | W | M | D | I | E | G | R | P | E | D | P | V | . |
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. |
. |
. |
E | I | A | L | . |
. |
Y | Q | P | S | S | G | C | Y | I | H | F | F | R | E | P | T | D | L | K | Q | F | K | Q | D | A | K | Y | S | H | G | I | D | V | T | D | L |
Template Known Secondary structure |   |
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | S |
| T | T | S |
| S | . | . | . | . | . | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | . | . | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | T | T | T | T | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| S |
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | T | T |
| B |
| G | G | G | G |
Template Predicted Secondary structure |   |
![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_a.png) | . | . | . | . | . | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | . | . | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
Template SS confidence |   |
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  |   |
386 | . | . | . | 390 | . | . | . | . | . | . | . | . | |
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. | 400 | . | . | |
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. | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . |
  |
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Predicted Secondary structure |   |
![](../webimg/helix2small.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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Query SS confidence |   |
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Query Sequence |   |
Y | R | E | A | L | T | E | Q | Q | T | A | V | A | W | G | E | V | Q | D | W | L | R | G | N | T | F | A | G | S | N | P | A | F | D | S | T | I | V | A | R | Q | R | V | T | Y | S | M | P | F | S | P | L | T | V | G | R | V | W | H | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . |
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| . | . | . |
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Template Conservation |   |
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| . | . | . | . | . | . |   |
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| . | . | . |
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Template Sequence |   |
F | A | T | Q | P | G | L | . |
. |
. |
. |
. |
. |
T | S | A | V | I | D | A | L | P | R | N | M | V | I | T | C | Q | G | S | D | D | . |
. |
. |
I | R | K | L | L | E | S | Q | G | R | K | D | I | K | L | I | D | I | A | L | S | K | T |
Template Known Secondary structure |   |
T | T | B |
| T | T | ![](../webimg/helix2small.png) | . | . | . | . | . | . | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | S |
| T | T |
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | S | S | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | . | . | . | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | T | T |
| T | T | S | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
Template Predicted Secondary structure |   |
![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | . | . | . | . | . | . | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | . | . | . | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
Template SS confidence |   |
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  |   |
439 | 440 | . | . | . | . | . | |
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. | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | |
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. | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . |
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126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
. | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| . |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
Query SS confidence |   |
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Query Sequence |   |
R | L | A | D | L | A | A | Y | A | A | G | K | L | N | I | D | P | T | E | L | E | G | L | D | A | V | A | E | R | L | G | V | P | V | V | . |
N | R | H | S | A | I | G | D | A | A | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | S | R | K | Y | E | N | A | V | W | D | Q | Y | K | D | L | C | H | M | H | T | G | V | V | V | E | K | K | K | R | G | G | K | E | E | I | T | P | H | C | A | L | M | D | C | I | M |
Template Known Secondary structure |   |
![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | T | T | T | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | G | G | G |
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| B |
| S |
| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| S | S | S | S |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
Template Predicted Secondary structure |   |
![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
Template SS confidence |   |
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  |   |
490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . |
  |