Job Description ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] Confidence 95.42% Date Mon Jun 7 16:50:03 BST 2021 Rank 94 Aligned Residues 132 % Identity 17% Template c2hbkA_ PDB info PDB header:hydrolase, gene regulation Chain: A: PDB Molecule:exosome complex exonuclease rrp6; PDBTitle: structure of the yeast nuclear exosome component, rrp6p, reveals an2 interplay between the active site and the hrdc domain; protein in3 complex with mn Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	Q	L	I	V	V	D	L	E	T	T	G	L	D	Y	D	T	A	L	P	V	E	V	G	L	L	N	V	D	T	G	E	S	L	Y	F	V	P	H	I	T	V	E	Q	L	A	A	A	D	P	K	A	M	E	I	N	G	Y
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	T	K	E	I	A	V	D	L	E	H	H	D	Y	R	S	Y	Y	G	I	V	C	L	M	Q	I	S	T	R	E	R	D	Y	L	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T		S											S	S	S	S	S											S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	R	G	L	Y	R	E	A	L	T	E	Q	Q	T	A	V	A	W	G	E	V	Q	D	W	L	R	G	N	T	F	A	G	S	N	P	A	F	D	S	T	I	V	A	R	Q	R	V	T	Y	S	M	P	F	S	P	L	T	V	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	T	L	K	L	R	E	N	L	H	I	L	N	E	V	F	T	.	N	P	S	I	V	K	V	F	H	G	A	F	M	D	I	I	W	L	Q	R	D	L	G	L	Y	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T	T	T	T	T	T	G	G	G	G					T	.		T	T	S					S	S																.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
										267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	W	H	H	R	L	A	D	L	A	A	Y	A	A	G	K	L	N	I	D	P	T	E	L	E	G	L	D	A	V	A	E	R	L	.	G	V	P	V	V	N	R	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																		.												.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	V	V	G	L	F	D	T	Y	H	A	S	K	A	I	G	L	P	.	R	H	S	L	A	Y	L	L	E	N	F	A	N	F	K	T	S	K	K	Y	Q	L	A	D	W	R	I	R	P	L	S	K	P	M	T	A
Template Known Secondary structure		.	.	.	.	.	.		S	S												T		S	.			S																T	T	T	T	S		T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.																		.
Template SS confidence
								308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
			165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	I	G	D	A	A	A	T	A	F	C	F	D	M	L	R	H
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	A	R	A	D	T	H	F	L	L	N	I	Y	D	Q	L	R	N
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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