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Job Description | ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] | Confidence | 47.90% | Date | Mon Jun 7 16:50:03 BST 2021 |
Rank | 108 | Aligned Residues | 73 |
% Identity | 11% | Template | c2ex3I_ |
PDB info |
PDB header:transferase/replication | Chain: I: PDB Molecule:dna polymerase; |
PDBTitle: bacteriophage phi29 dna polymerase bound to terminal protein
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Resolution | 3.00 Å |
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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | Q | L | I | V | V | D | L | E | T | T | G | L | D | Y | D | T | A | L | P | V | E | V | G | L | L | N | V | D | T | G | E | S | L | Y | F | V | P | H | I | T | V | E | Q | L | A | A | A | D | P | K | A | M | E | I | N | G | Y | Y | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | K | M | Y | S | C | A | F | E | T | T | . |
T | K | V | E | D | C | R | V | W | A | Y | G | Y | M | N | I | E | D | . |
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H | S | E | Y | K | I | G | N | S | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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6 | . | . | . | 10 | . | . | . | . | . | . | |
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63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | G | L | Y | R | E | A | L | T | E | Q | Q | T | A | V | A | W | G | E | V | Q | D | W | L | R | G | N | T | F | A | G | S | N | P | A | F | D | S | T | I | V | A | R | Q | R | V | T | Y | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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L | D | E | F | M | A | W | V | L | K | . |
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V | Q | A | D | L | Y | F | H | N | L | K | F | A | G | A | F | I | I | N | W | L | E | R | N | G |
Template Known Secondary structure |   |
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| S | | | | | S | S | | | | | | | | | | | | | | | T | T |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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44 | . | . | . | . | . | 50 | . | . | . | |
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. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
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publication with acknowledgement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
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