Return to main results Retrieve Phyre Job Id

Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence99.97%DateMon Jun 7 16:50:03 BST 2021
Rank10Aligned Residues173
% Identity13%Templatec1zbuB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:3'-5' exonuclease eri1; PDBTitle: crystal structure of full-length 3'-exonuclease
Resolution3.00 Å
Model Dimensions (Å)X:49.804 Y:50.094 Z:31.683

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10......... 20.........30... ......40.........50.......
Predicted Secondary structure 








....


...







Query SS confidence 














. . . .













. . .























Query Sequence  LIVVDLETTGLDYDT. . . . ALPVEVGLLNVDTG. . . ESLYFVPHITVEQLAAADPKAMEI
Query Conservation   
 

 




    ....  




 
     ...                       
Alig confidence 














....













...























Template Conservation   








          







 

    



 
  



  
  

 


 
Template Sequence  ICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISL
Template Known Secondary structure 





TT

TT



TTTTB

SSS
S

Template Predicted Secondary structure 

























Template SS confidence 



























































   130.........140.........150.........160.........170.........180.........
 
   58.60.........70.........80..... ....90......... 100.........110...
Predicted Secondary structure 







...




.



Query SS confidence 



























. . .













.













Query Sequence  NGYYERGLYREALTEQQTAVAWGEVQDW. . . LRGNTFAGSNPAFD. STIVARQRVTYSMP
Query Conservation   


   
                    ...            

.   
          
Alig confidence 



























...













.













Template Conservation 





 

 

 
 


  
  

    
       


 
  

   
  

    
 
Template Sequence  TGITQDQVDRADTFPQVLKKVIDLXKLKELGTKYKYSLLTDGSWDXSKFLNIQCQLSRLK
Template Known Secondary structure 


TSB
TTBTTTB
SSSTTTB
Template Predicted Secondary structure 






















Template SS confidence 



























































   190.........200.........210.........220.........230.........240.........
 
   114.....120.........130.........140.........150.........160. ........170..
Predicted Secondary structure 


























.


Query SS confidence 















































.










Query Sequence  FSPLTVGRVWHHRLADLAAYAAGKLNIDPTELEGLDAVAERLGVPVVN. RHSAIGDAAAT
Query Conservation                                    
  
    

    . 
 

 

  
Alig confidence 













.......


























.










Template Conservation   
      




 .......
           

   
  


  

  






 

Template Sequence  YPPFAKKWINIRKS. . . . . . . YGNFYKVPRSQTKLTIXLEKLGXDYDGRPHCGLDDSKNI
Template Known Secondary structure 

GGGS.......T

GGG
STT



S
TT
Template Predicted Secondary structure 




.......

















Template SS confidence 



























































   250.........260... ......270.........280.........290.........300..
 
   173......180....
Predicted Secondary structure 
Query SS confidence 











Query Sequence  AFCFDMLRHTAA
Query Conservation    
   
     
Alig confidence 











Template Conservation 
 

  

  
 
Template Sequence  ARIAVRXLQDGC
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 











   303......310....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in JSmol

Send structure to FirstGlance for more viewing options


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D