Job Description ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] Confidence 97.65% Date Mon Jun 7 16:50:03 BST 2021 Rank 79 Aligned Residues 159 % Identity 18% Template c1q8iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna polymerase ii; PDBTitle: crystal structure of escherichia coli dna polymerase ii Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	V	V	D	L	E	T	T	G	L	D	Y	D	T	A	L	P	V	E	V	G	L	L	N	V	D	T	G	E	S	L	Y	F	V	P	H	I	T	V	E	Q	L	A	A	A	D	P	K	A	M	E	I	N	G	Y	Y	E	R
Query Conservation
Alig confidence																.	.	.	.							.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.							.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		K	W	V	S	I	D	I	E	T	T	R	H	G	E	.	.	.	.	L	Y	C	I	G	L	.	.	E	G	C	G	Q	R	I	V	Y	M	L	G	P	E	N	G	D	A	S	S	L	D	F	E	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T	S		.	.	.	.							.	.			T	T								S	S			S			T	T		S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.							.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																			.																				.	.	.	.	.	.	.
Query SS confidence																																			.																				.	.	.	.	.	.	.
Query Sequence		G	L	Y	R	E	A	L	T	E	Q	Q	T	A	V	A	W	G	E	V	Q	D	W	L	R	G	N	T	F	A	G	S	N	P	.	A	F	D	S	T	I	V	A	R	Q	R	V	T	Y	S	M	P	F	S	.	.	.	.	.	.	.
Query Conservation																																			.																				.	.	.	.	.	.	.
Alig confidence		.	.																																.																				.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	L	E	Y	V	A	S	R	P	Q	L	L	E	K	L	N	A	W	F	A	N	Y	D	P	D	V	I	I	G	W	N	V	V	Q	F	D	L	R	M	L	Q	K	H	A	E	R	Y	R	L	P	L	R	L	G	R	D	N	S	E
Template Known Secondary structure		.	.					S	S																		S					S	S	T	T	T	T												T	T						S	S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
										116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	P	L	T	V	G	R	V	W	H	H	R	L	A	D	L	A	A	Y	A	A	G	K	L	N	I	D	P	T	E	L	E	G	L	D	A	V	A	E	R	L	G	V	P	V	V	N	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	W	R	E	H	G	F	K	N	G	V	F	F	A	Q	A	K	G	R	L	I	I	D	G	I	E	A	L	K	S	A	F	W	N	F	S	S	F	S	L	E	T	V	A	Q	E	L	L	M	D	E	I	D	R	R	F	A	E	D
Template Known Secondary structure									S	S	S							B	T	T	B												S					S										T	T			T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
						162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	R	H	S	A	I	G	D	A	A	A	T	A	F	C	F	D	M	L	R
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		K	P	A	L	A	T	Y	N	L	K	D	C	E	L	V	T	Q	I	F	H	K	T	E
Template Known Secondary structure																								T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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